STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS7Mitochondrial ribosomal protein S7. (307 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11.
  
 0.999
CD74
CD74 molecule.
  
 0.999
RPS14
Ribosomal protein S14.
  
 0.999
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
ENSJHYP00000000798
annotation not available
 
 0.999
MRPS5
Mitochondrial ribosomal protein S5.
  
 0.999
RPL28
Ribosomal protein L28.
   
 
 0.999
RPS3A
Ribosomal protein S3A.
   
 0.999
RPS13
Ribosomal protein S13.
  
 0.999
RPL5
Ribosomal protein L5.
  
 0.999
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.