STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSJHYP00000007540annotation not available (70 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 
 0.710
LDB2
LIM domain binding 2.
    
 
 0.710
LHX3
LIM homeobox 3.
    
 
 0.594
LHX4
LIM homeobox 4.
    
 
 0.594
LMO4
LIM domain only 4.
    
 
 0.571
ISL2
ISL LIM homeobox 2.
    
 
 0.520
LHX2
LIM homeobox 2.
    
 
 0.508
LHX9
LIM homeobox 9.
    
 
 0.508
LMO1
LIM domain only 1.
    
 
 0.463
LMO3
LIM domain only 3.
    
 
 0.463
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.