STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD6BOTU deubiquitinase 6B. (302 aa)    
Predicted Functional Partners:
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
  0.934
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
  0.826
ENSJHYP00000012048
annotation not available
   
  0.826
EIF4E1B
Eukaryotic translation initiation factor 4E family member 1B.
   
  0.797
EIF4E
Eukaryotic translation initiation factor 4E.
   
  0.797
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
  0.772
EIF4E3
Eukaryotic translation initiation factor 4E family member 3.
   
 0.736
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.616
EIF4E2
Eukaryotic translation initiation factor 4E family member 2.
   
 
  0.604
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.575
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.