STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD4Programmed cell death 4. (466 aa)    
Predicted Functional Partners:
ENSJHYP00000016971
annotation not available
    
 0.743
PPP2R2A
Protein phosphatase 2 regulatory subunit Balpha.
    
 0.724
ENSJHYP00000009162
annotation not available
    
 0.724
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
 0.715
ENSJHYP00000002063
annotation not available
   
 0.705
ENSJHYP00000002541
annotation not available
   
 0.705
EIF4A2
Eukaryotic translation initiation factor 4A2.
   
 0.705
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
     
 0.662
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.639
PDCD6
Programmed cell death 6.
     
 0.600
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.