STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR81WD repeat domain 81. (1905 aa)    
Predicted Functional Partners:
WDR91
WD repeat domain 91.
   
 
 0.965
ENSJHYP00000011742
annotation not available
    
 
 0.879
ATG5
Autophagy related 5.
    
 0.693
ATP6V0C
ATPase H+ transporting V0 subunit c.
     
 0.670
ATP6V0B
ATPase H+ transporting V0 subunit b.
     
 0.667
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
   
  
 0.663
NBR1
NBR1 autophagy cargo receptor.
   
 
 0.618
RBSN
Rabenosyn, RAB effector.
     
 0.611
ATG16L1
Autophagy related 16 like 1.
    
0.598
DIPK2A
Divergent protein kinase domain 2A.
   
  
 0.591
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.