STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF8pre-mRNA processing factor 8. (2333 aa)    
Predicted Functional Partners:
RBM22
RNA binding motif protein 22.
    
 0.999
MFAP1
Microfibril associated protein 1.
   
 0.999
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.999
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.999
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.999
ENSJHYP00000003456
annotation not available
   
 0.999
AQR
Aquarius intron-binding spliceosomal factor.
   
 0.999
AAR2
AAR2 splicing factor.
    
 0.999
CDC5L
Cell division cycle 5 like.
   
 0.999
PRPF19
pre-mRNA processing factor 19.
   
 0.999
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.