STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A4Solute carrier family 30 member 4. (443 aa)    
Predicted Functional Partners:
SLC39A13
Solute carrier family 39 member 13.
   
 0.679
SLC39A12
Solute carrier family 39 member 12.
   
 0.618
ENSJHYP00000009971
annotation not available
   
 0.616
SLC39A11
Solute carrier family 39 member 11.
   
 0.599
SLC39A14
Solute carrier family 39 member 14.
   
 0.583
SLC39A6
Solute carrier family 39 member 6.
   
 0.582
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.576
SLC30A6
Solute carrier family 30 member 6.
    
 
0.561
SLC39A9
Solute carrier family 39 member 9.
   
 
 0.545
OTOP1
Otopetrin 1.
   
  
 0.496
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.