STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL20Mitochondrial ribosomal protein L20. (150 aa)    
Predicted Functional Partners:
RPL11
Ribosomal protein L11.
  
 
 0.999
ENSJHYP00000000798
annotation not available
  
 
 0.999
RPL5
Ribosomal protein L5.
  
 
 0.999
MRPL22
Mitochondrial ribosomal protein L22.
  
 
 0.999
RPS15
Ribosomal protein S15.
  
 
 0.999
RPL35
Ribosomal protein L35.
  
 
 0.999
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.999
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.999
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 
 0.999
MRPS7
Mitochondrial ribosomal protein S7.
  
 
 0.999
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.