STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL38Mitochondrial ribosomal protein L38. (381 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.939
MRPL16
Mitochondrial ribosomal protein L16.
   
 0.922
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.908
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.908
ENSJHYP00000006354
annotation not available
   
 
 0.906
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.906
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.904
MRPL44
Mitochondrial ribosomal protein L44.
  
 
 0.902
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.899
MRPL36
Mitochondrial ribosomal protein L36.
  
 
 0.895
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.