STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLA1Obg like ATPase 1. (396 aa)    
Predicted Functional Partners:
PTRH1
peptidyl-tRNA hydrolase 1 homolog.
  
  
 0.955
MRPS7
Mitochondrial ribosomal protein S7.
  
 
 0.879
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
  
 0.873
YARS1
tyrosyl-tRNA synthetase 1.
  
  
 0.870
RRM1
Ribonucleotide reductase catalytic subunit M1.
     
 0.870
EEF1G
Eukaryotic translation elongation factor 1 gamma.
  
 
 0.842
RARS1
arginyl-tRNA synthetase 1.
  
  
 0.838
RARS2
arginyl-tRNA synthetase 2, mitochondrial.
  
  
 0.838
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.824
ENSJHYP00000003858
annotation not available
  
 
 0.790
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.