STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERGEFSecretion regulating guanine nucleotide exchange factor. (397 aa)    
Predicted Functional Partners:
DPH3
Diphthamide biosynthesis 3.
    
 
 0.982
ENSJHYP00000003974
annotation not available
   
 0.740
RANBP2
RAN binding protein 2.
   
 0.732
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.687
EXOC2
Exocyst complex component 2.
    
 
 0.608
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.587
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.587
NMB
Neuromedin B.
    
 
 0.586
ENSJHYP00000017265
annotation not available
    
  0.582
ENSJHYP00000018322
annotation not available
    
  0.582
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.