STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX33DEAH-box helicase 33. (669 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.977
CDC5L
Cell division cycle 5 like.
   
 0.975
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.974
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.974
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.969
PRPF19
pre-mRNA processing factor 19.
   
 0.969
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.968
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.967
RNASEL
Ribonuclease L.
   
 0.967
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
 0.967
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.