STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSHZ1Teashirt zinc finger homeobox 1. (1060 aa)    
Predicted Functional Partners:
MEIS1
Meis homeobox 1.
   
 0.815
MEIS2
Meis homeobox 2.
   
 0.815
WWTR1
WW domain containing transcription regulator 1.
     
 0.652
YAP1
Yes associated protein 1.
     
 0.652
TGIF1
TGFB induced factor homeobox 1.
    
 0.575
TGIF2
TGFB induced factor homeobox 2.
    
 0.575
MKX
Mohawk homeobox.
    
 0.575
PKNOX2
PBX/knotted 1 homeobox 2.
    
 0.575
IRX4
Iroquois homeobox 4.
    
 0.575
IRX2
Iroquois homeobox 2.
    
 0.575
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.