STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASIC1Acid sensing ion channel subunit 1. (492 aa)    
Predicted Functional Partners:
ASIC4
Acid sensing ion channel subunit family member 4.
  
  
0.610
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 0.585
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 0.585
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
    
 0.585
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.585
STOM
Stomatin.
    
 0.571
STOML3
Stomatin like 3.
    
 0.571
NPHS2
NPHS2 stomatin family member, podocin.
    
 0.539
ITCH
Itchy E3 ubiquitin protein ligase.
    
  0.521
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
  0.521
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.