STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN3Contactin 3. (1006 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.891
APP
Amyloid beta precursor protein.
   
 
 0.833
NFASC
Neurofascin.
   
0.779
CHL1
Cell adhesion molecule L1 like.
    
0.777
NRCAM
Neuronal cell adhesion molecule.
    
0.777
CNTNAP2
Contactin associated protein like 2.
   
 0.670
CNTNAP1
Contactin associated protein 1.
   
 0.663
GYPC
Glycophorin C (Gerbich blood group).
   
 0.663
CNTNAP5
Contactin associated protein like 5.
   
 0.663
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.626
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.