STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4BSemaphorin 4B. (830 aa)    
Predicted Functional Partners:
PLXNB1
Plexin B1.
    
0.790
PLXNB2
Plexin B2.
    
0.790
ENSJHYP00000008445
annotation not available
    
 0.767
MET
MET proto-oncogene, receptor tyrosine kinase.
    
0.767
PLXND1
Plexin D1.
    
0.651
ENSJHYP00000001074
annotation not available
    
 
0.634
ENSJHYP00000001586
annotation not available
    
 
0.634
SEMA4G
Semaphorin 4G.
    
 
0.634
ENSJHYP00000001828
annotation not available
    
0.626
PLXNC1
Plexin C1.
    
0.626
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.