STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A1ATPase 13A1. (1249 aa)    
Predicted Functional Partners:
ENSJHYP00000013398
annotation not available
    
 0.731
PLN
Phospholamban.
    
 0.711
ENSJHYP00000012443
annotation not available
    
 0.667
TMEM30A
Transmembrane protein 30A.
    
 0.667
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
 0.636
CALML4
Calmodulin like 4.
   
 
 0.626
SLC11A1
Solute carrier family 11 member 1.
   
 0.593
ENSJHYP00000023061
annotation not available
   
 
 0.592
ATP4B
ATPase H+/K+ transporting subunit beta.
    
 0.586
ABI3BP
ABI family member 3 binding protein.
    
 0.586
Your Current Organism:
Junco hyemalis
NCBI taxonomy Id: 40217
Other names: J. hyemalis, dark-eyed junco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.