Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARI75555.1 | ARI75556.1 | HM131_01370 | HM131_01375 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.437 |
ARI75556.1 | ARI75555.1 | HM131_01375 | HM131_01370 | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.437 |
ARI75556.1 | ARI75624.1 | HM131_01375 | HM131_01740 | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
ARI75556.1 | ARI75841.1 | HM131_01375 | HM131_02930 | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
ARI75556.1 | ARI78537.1 | HM131_01375 | HM131_17590 | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.400 |
ARI75624.1 | ARI75556.1 | HM131_01740 | HM131_01375 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.430 |
ARI75841.1 | ARI75556.1 | HM131_02930 | HM131_01375 | Acyl CoA:acetate/3-ketoacid CoA transferase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.401 |
ARI78537.1 | ARI75556.1 | HM131_17590 | HM131_01375 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Short-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |