STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rocACatalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. RocA subfamily. (515 aa)    
Predicted Functional Partners:
ARI76658.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
ARI79084.1
Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.995
ARI75765.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.935
ARI77227.1
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
 0.927
ARI78454.1
Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
 0.925
rocD
Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
  
 0.919
rocD-2
Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.
  
 0.919
ARI77280.1
Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.918
ARI75766.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.913
ARI78164.1
D-amino-acid transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.910
Your Current Organism:
Halobacillus mangrovi
NCBI taxonomy Id: 402384
Other names: CCM 7397, CECT 7206, H. mangrovi, Halobacillus mangrovi Soto-Ramirez et al. 2008, strain MS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.