STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gvpAGas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (97 aa)    
Predicted Functional Partners:
ARI76459.1
Gas vesicle protein K; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.917
ARI76456.1
Gas vesicle protein GvpF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.915
ARI76455.1
Gas vesicle protein GvpN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.914
ARI76458.1
Gas vesicle protein GvpS; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.902
ARI76457.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.899
ARI79136.1
Gas vesicle protein GvpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
ARI76452.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.737
ARI76460.1
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
0.690
ARI76454.1
Gas vesicle protein GvpR; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.616
ARI76461.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.461
Your Current Organism:
Halobacillus mangrovi
NCBI taxonomy Id: 402384
Other names: CCM 7397, CECT 7206, H. mangrovi, Halobacillus mangrovi Soto-Ramirez et al. 2008, strain MS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.