STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARI77832.1Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
ARI77831.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.993
ARI77833.1
Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.986
ARI78128.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.982
ARI76138.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.868
ARI76329.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.867
ARI77714.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.864
ARI78778.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.864
ARI78977.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.864
ARI76492.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.862
ARI76281.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.857
Your Current Organism:
Halobacillus mangrovi
NCBI taxonomy Id: 402384
Other names: CCM 7397, CECT 7206, H. mangrovi, Halobacillus mangrovi Soto-Ramirez et al. 2008, strain MS10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.