STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC00717.1Microcin C transport system ATP-binding protein. (532 aa)    
Predicted Functional Partners:
SFC00687.1
Microcin C transport system permease protein.
 
 0.992
SFC27094.1
Oligopeptide transport system permease protein.
 
 0.990
SFC65226.1
Dipeptide transport system permease protein.
 
 0.990
SFC00669.1
Microcin C transport system permease protein.
 
 0.973
SFC00639.1
Microcin C transport system substrate-binding protein.
 
 
 0.959
SFC50552.1
Peptide/nickel transport system permease protein.
 
 0.944
SFC65201.1
Dipeptide transport system permease protein.
 
 0.925
SFC27123.1
Oligopeptide transport system permease protein.
 
 0.907
SFC27226.1
Oligopeptide transport system substrate-binding protein.
 
 
 0.754
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
       0.747
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.