STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC07069.1Quinate dehydrogenase (quinone). (811 aa)    
Predicted Functional Partners:
SFC53560.1
Cytochrome c, mono-and diheme variants.
   
 
 0.796
SFC51659.1
Quinoprotein glucose dehydrogenase.
  
  
 
0.778
SFC27718.1
Gluconolactonase.
  
  
 0.765
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.732
SFC85407.1
Fructose-bisphosphate aldolase.
   
 
  0.732
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.731
SFC60785.1
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
  0.723
SFC04724.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.722
SFC71627.1
Glutathione-independent formaldehyde dehydrogenase.
   
 
  0.562
SFC74839.1
Gluconolactonase.
  
  
 0.482
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.