STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC10102.1Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. (430 aa)    
Predicted Functional Partners:
SFC82587.1
Hypothetical protein.
  
     0.700
SFB99470.1
Replication region DNA-binding N-term.
  
     0.624
SFC91007.1
Tyrosine-protein kinase Etk/Wzc.
     
 0.587
SFC75755.1
FAD-dependent urate hydroxylase.
  
 
  0.567
SFC10074.1
Protein of unknown function.
  
    0.562
SFC76328.1
Hypothetical protein.
  
     0.523
SFC44961.1
TIGR02444 family protein.
  
     0.522
SFC74483.1
Uncharacterized membrane protein YccC.
  
     0.501
SFC02298.1
Membrane-bound lytic murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
  
     0.485
SFC45163.1
Histidinol-phosphate aminotransferase.
  
     0.466
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.