STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC26487.1Signal transduction histidine kinase. (438 aa)    
Predicted Functional Partners:
SFC60553.1
PAS domain S-box-containing protein.
 
 
 0.984
SFC26525.1
Two component transcriptional regulator, winged helix family.
  0.980
SFC76844.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.955
SFC44093.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.914
SFC08710.1
Two component transcriptional regulator, winged helix family.
 
  0.904
SFC36401.1
Two-component system, OmpR family, response regulator TctD.
 
  0.872
SFC43159.1
Two-component system, OmpR family, response regulator TctD.
  
  0.864
SFC48407.1
Two-component system, OmpR family, response regulator/two-component system, OmpR family, response regulator QseB.
  
  0.855
SFC62949.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
 0.849
SFB96592.1
Helix-turn-helix domain-containing protein.
   
 0.844
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.