STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC29560.1Type IV pilus assembly protein PilP. (175 aa)    
Predicted Functional Partners:
SFC29521.1
Type IV pilus assembly protein PilN.
 
 
 0.999
SFC29590.1
Type IV pilus assembly protein PilQ.
 
 
 0.999
SFC29533.1
Type IV pilus assembly protein PilO.
 
 
 0.998
SFC29497.1
Type IV pilus assembly protein PilM.
 
 
 0.995
SFC67109.1
Hypothetical protein.
  
 
   0.960
SFC80412.1
Type IV pilus assembly protein PilC.
  
 
 
 0.925
SFC80396.1
Type IV pilus assembly protein PilB.
  
 
 
 0.916
SFC76773.1
Tfp pilus assembly protein PilW.
  
  
 0.843
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.828
SFC03388.1
Type IV pilus assembly protein PilZ.
  
   
 0.812
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.