STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (393 aa)    
Predicted Functional Partners:
SFC30489.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
 
 0.976
SFC30311.1
2-keto-3-deoxygluconate kinase.
 
  
 0.960
SFC30387.1
Mannonate dehydratase.
    
 0.949
SFC25067.1
Mannitol 2-dehydrogenase.
 
 0.898
SFC73698.1
Gluconate 5-dehydrogenase.
  
 
  0.796
SFC59751.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
 
  0.790
SFC88005.1
Galactonate dehydratase.
     
 0.766
SFC44893.1
Hypothetical protein.
 
 
 
  0.762
SFC36192.1
6-phosphogluconate dehydrogenase (decarboxylating).
    
  0.755
SFC70875.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
  0.751
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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