STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC32585.1CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. (511 aa)    
Predicted Functional Partners:
SFC32598.1
LicD family protein.
       0.786
SFC32622.1
Hypothetical protein.
       0.671
SFC32654.1
Glycerol-3-phosphate cytidylyltransferase.
 
  
 0.605
SFC32640.1
CDP-glycerol glycerophosphotransferase, TagB/SpsB family.
       0.580
flgK
Flagellar hook-associated protein 1 FlgK.
  
    0.566
SFC32702.1
Stealth protein CR1, conserved region 1.
 
     0.472
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.449
SFC73451.1
NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains.
  
     0.442
SFC91007.1
Tyrosine-protein kinase Etk/Wzc.
 
   
 0.422
SFC32669.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
       0.409
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.