STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC33811.1Amino acid ABC transporter membrane protein 2, PAAT family. (222 aa)    
Predicted Functional Partners:
SFC33853.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.995
SFC33870.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.992
SFC65985.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.985
SFC70953.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.984
SFC45759.1
General L-amino acid transport system ATP-binding protein.
 0.983
SFC70923.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.983
SFC33836.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
  
 
0.977
SFC65946.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
     0.957
SFC70990.1
Cyclohexadienyl dehydratase.
 
 0.810
SFC45793.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 
0.798
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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