STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC49075.1TctA family transporter. (508 aa)    
Predicted Functional Partners:
SFC49029.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.942
SFC49055.1
Putative tricarboxylic transport membrane protein.
 
 
 0.906
SFC05884.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.847
SFC05999.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.847
SFC06107.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.847
SFC47618.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.847
SFC79631.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.847
SFC79718.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.847
SFC88299.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.846
SFC43135.1
Putative tricarboxylic transport membrane protein.
 
    0.844
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.