STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC63762.1Transcriptional regulator, GntR family. (251 aa)    
Predicted Functional Partners:
SFC30369.1
Transcriptional regulator, GntR family.
  
     0.770
SFC12877.1
Transcriptional regulator, GntR family.
  
     0.769
SFC71609.1
Ferredoxin-NADP reductase.
    
  0.744
SFC79521.1
Transcriptional regulator, GntR family.
  
    0.649
SFC85227.1
DNA-binding transcriptional regulator, GntR family.
  
    0.635
SFC47583.1
DNA-binding transcriptional regulator, GntR family.
  
    0.609
SFC63739.1
Sugar lactone lactonase YvrE.
 
     0.600
SFC37002.1
Transcriptional regulator, GntR family.
  
    0.570
SFC86985.1
Transcriptional regulator, GntR family.
  
    0.528
SFC47281.1
Transcriptional regulator, GntR family.
  
    0.495
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.