STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC90990.1Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. (428 aa)    
Predicted Functional Partners:
SFC91007.1
Tyrosine-protein kinase Etk/Wzc.
 
 
 0.991
SFC32721.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.979
SFC91023.1
Polysaccharide export outer membrane protein.
 
 
 0.853
SFC90918.1
Glycosyl transferase family 2.
    0.836
SFC90967.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.726
SFC90938.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.678
SFC59855.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.586
SFC72013.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.546
SFC32737.1
O-antigen ligase.
 
  
 0.545
SFC85813.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.517
Your Current Organism:
Kushneria avicenniae
NCBI taxonomy Id: 402385
Other names: CCM 7396, CECT 7193, CIP 109711, DSM 23439, Halomonas avicenniae, Halomonas avicenniae Soto-Ramirez et al. 2007, K. avicenniae, Kushneria avicenniae (Soto-Ramirez et al. 2007) Sanchez-Porro et al. 2009, strain MW2a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.