STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB47850.1DNA-binding transcriptional regulator, HxlR family. (158 aa)    
Predicted Functional Partners:
SEB47826.1
Uncharacterized domain 1-containing protein.
 
     0.684
SEB87337.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.623
SEB87641.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.620
SEB46997.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.530
SEC66176.1
Hypothetical protein.
  
    0.516
SEB58187.1
PemK-like, MazF-like toxin of type II toxin-antitoxin system.
   
    0.447
SEB55162.1
SnoaL-like domain-containing protein.
 
     0.413
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.