Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB49963.1 | SEB50066.1 | SAMN04489844_0306 | SAMN04489844_0310 | Glutamate dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.876 |
SEB49963.1 | SEC30621.1 | SAMN04489844_0306 | SAMN04489844_2050 | Glutamate dehydrogenase. | L-proline dehydrogenase. | 0.516 |
SEB49963.1 | SEC89242.1 | SAMN04489844_0306 | SAMN04489844_3200 | Glutamate dehydrogenase. | L-glutamine synthetase. | 0.937 |
SEB49963.1 | SEC96035.1 | SAMN04489844_0306 | SAMN04489844_3345 | Glutamate dehydrogenase. | L-glutamine synthetase. | 0.948 |
SEB49963.1 | SED01484.1 | SAMN04489844_0306 | SAMN04489844_3475 | Glutamate dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.958 |
SEB49963.1 | SED01526.1 | SAMN04489844_0306 | SAMN04489844_3476 | Glutamate dehydrogenase. | Glutamate synthase (NADH) small subunit. | 0.899 |
SEB49963.1 | SED03213.1 | SAMN04489844_0306 | SAMN04489844_3519 | Glutamate dehydrogenase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.802 |
SEB49963.1 | gcvP | SAMN04489844_0306 | SAMN04489844_3715 | Glutamate dehydrogenase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.875 |
SEB50066.1 | SEB49963.1 | SAMN04489844_0310 | SAMN04489844_0306 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate dehydrogenase. | 0.876 |
SEB50066.1 | SEC30621.1 | SAMN04489844_0310 | SAMN04489844_2050 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-proline dehydrogenase. | 0.990 |
SEB50066.1 | SEC89242.1 | SAMN04489844_0310 | SAMN04489844_3200 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-glutamine synthetase. | 0.879 |
SEB50066.1 | SEC96035.1 | SAMN04489844_0310 | SAMN04489844_3345 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-glutamine synthetase. | 0.875 |
SEB50066.1 | SED01484.1 | SAMN04489844_0310 | SAMN04489844_3475 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.918 |
SEB50066.1 | SED01526.1 | SAMN04489844_0310 | SAMN04489844_3476 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (NADH) small subunit. | 0.886 |
SEB50066.1 | SED03213.1 | SAMN04489844_0310 | SAMN04489844_3519 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.846 |
SEB50066.1 | gcvP | SAMN04489844_0310 | SAMN04489844_3715 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.811 |
SEB50066.1 | proA | SAMN04489844_0310 | SAMN04489844_3042 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.878 |
SEB50066.1 | proC | SAMN04489844_0310 | SAMN04489844_2051 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.879 |
SEC30621.1 | SEB49963.1 | SAMN04489844_2050 | SAMN04489844_0306 | L-proline dehydrogenase. | Glutamate dehydrogenase. | 0.516 |
SEC30621.1 | SEB50066.1 | SAMN04489844_2050 | SAMN04489844_0310 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.990 |
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