Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB28574.1 | SEB53707.1 | SAMN04489844_0021 | SAMN04489844_0445 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB28574.1 | SEB80894.1 | SAMN04489844_0021 | SAMN04489844_1104 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.833 |
SEB28574.1 | SEB88648.1 | SAMN04489844_0021 | SAMN04489844_1259 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.712 |
SEB28574.1 | SEB96677.1 | SAMN04489844_0021 | SAMN04489844_1416 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.809 |
SEB28574.1 | SEC11383.1 | SAMN04489844_0021 | SAMN04489844_1705 | Signal transduction histidine kinase. | Histidine kinase. | 0.460 |
SEB28574.1 | SEC70239.1 | SAMN04489844_0021 | SAMN04489844_2813 | Signal transduction histidine kinase. | Two-component system, NarL family, sensor histidine kinase UhpB. | 0.454 |
SEB28574.1 | SEC86710.1 | SAMN04489844_0021 | SAMN04489844_3147 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.750 |
SEB53707.1 | SEB28574.1 | SAMN04489844_0445 | SAMN04489844_0021 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB53707.1 | SEB80894.1 | SAMN04489844_0445 | SAMN04489844_1104 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.874 |
SEB53707.1 | SEB80944.1 | SAMN04489844_0445 | SAMN04489844_1105 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB53707.1 | SEB88648.1 | SAMN04489844_0445 | SAMN04489844_1259 | Signal transduction histidine kinase. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.982 |
SEB53707.1 | SEB96677.1 | SAMN04489844_0445 | SAMN04489844_1416 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB53707.1 | SEC11383.1 | SAMN04489844_0445 | SAMN04489844_1705 | Signal transduction histidine kinase. | Histidine kinase. | 0.816 |
SEB53707.1 | SEC17343.1 | SAMN04489844_0445 | SAMN04489844_1817 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB53707.1 | SEC70239.1 | SAMN04489844_0445 | SAMN04489844_2813 | Signal transduction histidine kinase. | Two-component system, NarL family, sensor histidine kinase UhpB. | 0.816 |
SEB53707.1 | SEC86710.1 | SAMN04489844_0445 | SAMN04489844_3147 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.816 |
SEB53707.1 | SED35041.1 | SAMN04489844_0445 | SAMN04489844_4233 | Signal transduction histidine kinase. | Histidine kinase. | 0.816 |
SEB80894.1 | SEB28574.1 | SAMN04489844_1104 | SAMN04489844_0021 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.833 |
SEB80894.1 | SEB53707.1 | SAMN04489844_1104 | SAMN04489844_0445 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.874 |
SEB80894.1 | SEB80944.1 | SAMN04489844_1104 | SAMN04489844_1105 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.946 |
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