STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC71403.1Peptide/nickel transport system permease protein. (344 aa)    
Predicted Functional Partners:
SEC71305.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.999
SEC71351.1
Peptide/nickel transport system permease protein.
 
 
 0.997
SED18998.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
SEC71447.1
Peptide/nickel transport system substrate-binding protein.
  0.979
SED08561.1
Peptide/nickel transport system permease protein.
 
 0.943
SED27856.1
Peptide/nickel transport system permease protein.
 
 0.943
SED08608.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.921
SED27714.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.921
SEB65500.1
Peptide/nickel transport system permease protein.
 
 
 0.915
SED27675.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.904
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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