Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB94969.1 | SED15807.1 | SAMN04489844_1384 | SAMN04489844_3799 | Prephenate dehydratase. | Prephenate dehydrogenase. | 0.979 |
SEB94969.1 | SED27339.1 | SAMN04489844_1384 | SAMN04489844_4067 | Prephenate dehydratase. | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 0.810 |
SEB94969.1 | aroA | SAMN04489844_1384 | SAMN04489844_2926 | Prephenate dehydratase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.717 |
SEB94969.1 | aroB | SAMN04489844_1384 | SAMN04489844_4063 | Prephenate dehydratase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.787 |
SEB94969.1 | aroC | SAMN04489844_1384 | SAMN04489844_4065 | Prephenate dehydratase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.895 |
SEB94969.1 | aroK | SAMN04489844_1384 | SAMN04489844_4064 | Prephenate dehydratase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.762 |
SEB94969.1 | cmk | SAMN04489844_1384 | SAMN04489844_3798 | Prephenate dehydratase. | Cytidylate kinase. | 0.616 |
SEC75676.1 | aroA | SAMN04489844_2927 | SAMN04489844_2926 | Uncharacterized membrane protein YphA, DoxX/SURF4 family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.790 |
SEC75676.1 | rsgA | SAMN04489844_2927 | SAMN04489844_2925 | Uncharacterized membrane protein YphA, DoxX/SURF4 family. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.790 |
SED15807.1 | SEB94969.1 | SAMN04489844_3799 | SAMN04489844_1384 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.979 |
SED15807.1 | aroA | SAMN04489844_3799 | SAMN04489844_2926 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.962 |
SED15807.1 | aroB | SAMN04489844_3799 | SAMN04489844_4063 | Prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.882 |
SED15807.1 | aroC | SAMN04489844_3799 | SAMN04489844_4065 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.970 |
SED15807.1 | aroK | SAMN04489844_3799 | SAMN04489844_4064 | Prephenate dehydrogenase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.868 |
SED15807.1 | cmk | SAMN04489844_3799 | SAMN04489844_3798 | Prephenate dehydrogenase. | Cytidylate kinase. | 0.983 |
SED27339.1 | SEB94969.1 | SAMN04489844_4067 | SAMN04489844_1384 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Prephenate dehydratase. | 0.810 |
SED27339.1 | aroA | SAMN04489844_4067 | SAMN04489844_2926 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.997 |
SED27339.1 | aroB | SAMN04489844_4067 | SAMN04489844_4063 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.999 |
SED27339.1 | aroC | SAMN04489844_4067 | SAMN04489844_4065 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.994 |
SED27339.1 | aroK | SAMN04489844_4067 | SAMN04489844_4064 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.998 |
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