Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB45673.1 | SEB53707.1 | SAMN04489844_0143 | SAMN04489844_0445 | Stage II sporulation protein E (SpoIIE). | Signal transduction histidine kinase. | 0.906 |
SEB45673.1 | SEB71980.1 | SAMN04489844_0143 | SAMN04489844_0917 | Stage II sporulation protein E (SpoIIE). | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | 0.888 |
SEB45673.1 | SEB89276.1 | SAMN04489844_0143 | SAMN04489844_1272 | Stage II sporulation protein E (SpoIIE). | Flagellar hook protein FlgE. | 0.587 |
SEB45673.1 | SEC21898.1 | SAMN04489844_0143 | SAMN04489844_1898 | Stage II sporulation protein E (SpoIIE). | FO synthase subunit 1 /FO synthase subunit 2. | 0.794 |
SEB45673.1 | SEC76633.1 | SAMN04489844_0143 | SAMN04489844_2946 | Stage II sporulation protein E (SpoIIE). | Serine/threonine-protein kinase RsbW. | 0.885 |
SEB45673.1 | SEC85778.1 | SAMN04489844_0143 | SAMN04489844_3128 | Stage II sporulation protein E (SpoIIE). | Hypothetical protein. | 0.794 |
SEB53707.1 | SEB45673.1 | SAMN04489844_0445 | SAMN04489844_0143 | Signal transduction histidine kinase. | Stage II sporulation protein E (SpoIIE). | 0.906 |
SEB53707.1 | SEB71980.1 | SAMN04489844_0445 | SAMN04489844_0917 | Signal transduction histidine kinase. | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | 0.634 |
SEB53707.1 | SEB89276.1 | SAMN04489844_0445 | SAMN04489844_1272 | Signal transduction histidine kinase. | Flagellar hook protein FlgE. | 0.554 |
SEB53707.1 | SEC76633.1 | SAMN04489844_0445 | SAMN04489844_2946 | Signal transduction histidine kinase. | Serine/threonine-protein kinase RsbW. | 0.634 |
SEB53707.1 | SEC85778.1 | SAMN04489844_0445 | SAMN04489844_3128 | Signal transduction histidine kinase. | Hypothetical protein. | 0.839 |
SEB53707.1 | SED20679.1 | SAMN04489844_0445 | SAMN04489844_3913 | Signal transduction histidine kinase. | Stage II sporulation protein E (SpoIIE). | 0.906 |
SEB71980.1 | SEB45673.1 | SAMN04489844_0917 | SAMN04489844_0143 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Stage II sporulation protein E (SpoIIE). | 0.888 |
SEB71980.1 | SEB53707.1 | SAMN04489844_0917 | SAMN04489844_0445 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Signal transduction histidine kinase. | 0.634 |
SEB71980.1 | SEB89276.1 | SAMN04489844_0917 | SAMN04489844_1272 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Flagellar hook protein FlgE. | 0.707 |
SEB71980.1 | SEC21898.1 | SAMN04489844_0917 | SAMN04489844_1898 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | FO synthase subunit 1 /FO synthase subunit 2. | 0.794 |
SEB71980.1 | SEC76633.1 | SAMN04489844_0917 | SAMN04489844_2946 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Serine/threonine-protein kinase RsbW. | 0.574 |
SEB71980.1 | SEC85778.1 | SAMN04489844_0917 | SAMN04489844_3128 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Hypothetical protein. | 0.922 |
SEB71980.1 | SED20679.1 | SAMN04489844_0917 | SAMN04489844_3913 | Anti-sigma regulatory factor (Ser/Thr protein kinase); Manually curated. | Stage II sporulation protein E (SpoIIE). | 0.871 |
SEB89276.1 | SEB45673.1 | SAMN04489844_1272 | SAMN04489844_0143 | Flagellar hook protein FlgE. | Stage II sporulation protein E (SpoIIE). | 0.587 |
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