STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED12377.1Small basic protein. (110 aa)    
Predicted Functional Partners:
SED12424.1
Uncharacterized conserved protein YlxW, UPF0749 family.
 
    0.984
SED12332.1
Uncharacterized conserved protein YlxW, UPF0749 family.
 
    0.978
SED12472.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.868
SEC00614.1
Uncharacterized conserved protein YlxW, UPF0749 family.
 
    0.865
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.848
SED12523.1
Hemolysin, contains CBS domains.
       0.727
SED12570.1
Hemolysin, contains CBS domains.
       0.726
SED12242.1
Zinc-ribbon domain-containing protein.
       0.675
SED12206.1
MerR family regulatory protein.
       0.620
SEC75143.1
Ribosome-associated protein.
   
    0.606
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.