STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED24026.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (154 aa)    
Predicted Functional Partners:
SEB61042.1
Apoptosis-inducing factor, C-term.
  
 0.933
SED15331.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.933
SEC11539.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 0.892
SED20405.1
uroporphyrinogen-III C-methyltransferase.
  
  
 0.854
SEC49010.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.776
SEC31860.1
Uroporphyrinogen III methyltransferase / synthase.
  
  
 0.771
SED01484.1
Glutamate synthase (NADH) large subunit.
  
 
 0.766
SEC34641.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.723
SEB83768.1
Ferredoxin-NADP reductase.
  
 
 0.685
SEC74271.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.685
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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