STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED24365.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
SEC99131.1
Virulence factor.
  
     0.735
SED01014.1
Sulfotransferase family protein.
  
     0.692
SED24321.1
Sulfotransferase family protein.
  
     0.681
SEB67574.1
Core-2/I-Branching enzyme.
  
     0.657
SED44339.1
Hypothetical protein.
  
     0.655
SEC32925.1
Uncharacterized conserved protein, DUF1330 family.
 
     0.653
SED24411.1
Dienelactone hydrolase family protein.
       0.561
SEC36978.1
Protein of unknown function.
  
     0.555
SEC67920.1
L-erythro-3-methylmalyl-CoA dehydratase.
  
     0.491
SEC37253.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
  
     0.428
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.