STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED25698.1Cardiolipin synthase. (414 aa)    
Predicted Functional Partners:
SED25737.1
Transmembrane secretion effector.
  
    0.774
SED25775.1
Hypothetical protein.
       0.773
SED22708.1
Nitrogen fixation protein NifU.
   
   0.756
SEB94538.1
Lipid kinase, YegS/Rv2252/BmrU family.
 
 0.723
SED40403.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.702
SED21027.1
Phosphoserine phosphatase.
    
 0.668
SEB55543.1
Cystathionine beta-synthase.
    
  0.665
SEC97821.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.652
SED25655.1
Hypothetical protein.
       0.648
SEB92674.1
Putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase.
    
 0.628
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
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