STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED32640.1UDP-galactopyranose mutase. (434 aa)    
Predicted Functional Partners:
SED29309.1
Phytoene/squalene synthetase.
 
 
 0.938
SED32597.1
Protein of unknown function.
 
     0.799
SED32544.1
Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC.
       0.753
SED29365.1
Phytoene desaturase.
 
  
 
0.734
SEB78417.1
Magnesium chelatase subunit D.
 
 
 0.595
SED32482.1
Hypothetical protein.
       0.515
SED29539.1
4,4'-diaponeurosporenoate glycosyltransferase.
 
  
 0.508
SEB68875.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
  0.499
SEB86143.1
UDP-glucose 4-epimerase.
     
  0.499
SED32381.1
Hypothetical protein.
       0.463
Your Current Organism:
Nocardioides exalbidus
NCBI taxonomy Id: 402596
Other names: CCTCC AA206016, DSM 22017, IAM 15416, JCM 23199, N. exalbidus, Nocardioides exalbidus Li et al. 2007, strain RC825
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.