STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP68230.1Collagen, type III, alpha. (273 aa)    
Predicted Functional Partners:
SEQ43462.1
N-terminal domain of Peptidase_S41.
  
  0.800
SES29807.1
Syndecan 1.
  
  
  0.750
SER01591.1
Glycine amidinotransferase.
  
     0.734
SEP74051.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.726
SES20455.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
  0.693
SEP88527.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.692
SEQ82582.1
Proprotein convertase P-domain-containing protein.
  
  0.692
SER68271.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.692
SES25178.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
  0.692
SER22514.1
Acyl-CoA thioester hydrolase/BAAT N-terminal region.
  
 
  0.644
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.