STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP72053.1ABC-2 type transport system ATP-binding protein. (300 aa)    
Predicted Functional Partners:
SEP72091.1
ABC-2 type transport system permease protein.
 
     0.863
SEQ15463.1
ABC-2 type transport system permease protein.
   
  0.646
SEQ45815.1
ABC-2 type transport system permease protein.
   
  0.646
SES30091.1
ABC-2 type transport system permease protein.
   
  0.646
SES36441.1
ABC-2 family transporter protein.
   
  0.622
SES07017.1
ABC-2 family transporter protein.
  
     0.607
SER59757.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.574
SES05322.1
ABC-2 type transport system permease protein.
  
 
  0.546
SEP72119.1
ABC-2 type transport system ATP-binding protein.
 
    
0.539
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.512
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.