STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP63712.1rhamnopyranosyl-N-acetylglucosaminyl-diphospho- decaprenol beta-1,3/1,4-galactofuranosyltransferase. (300 aa)    
Predicted Functional Partners:
SEP63653.1
ABC-2 type transport system permease protein.
 
  
 0.992
SEP63956.1
UDP-galactopyranose mutase.
 
 
 0.971
SEP63902.1
galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.
 
  
 0.970
SEP63932.1
galactofuranosylgalactofuranosylrhamnosyl-N- acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase.
 
  
 0.970
SEP63679.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.967
SEQ80522.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.873
SEP96206.1
N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase.
  
  
 0.772
SEP65393.1
Protein of unknown function.
  
     0.753
SEP96093.1
Glycosyltransferase, GT2 family.
  
  
 0.741
SES12673.1
Protein of unknown function.
  
     0.737
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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