STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP78048.1FtsK/SpoIIIE family protein. (504 aa)    
Predicted Functional Partners:
SEP78018.1
FtsK/SpoIIIE family protein.
 
    
0.838
SEP63326.1
Hypothetical protein.
  
 
   0.785
SER96743.1
PPE family protein.
  
 
   0.740
SEQ12154.1
O-Antigen ligase.
  
     0.729
SEP88760.1
Type VII secretion integral membrane protein EccD.
 
 
 0.719
SEP63356.1
Hypothetical protein.
  
 
   0.707
SEP84241.1
Hypothetical protein.
 
     0.703
SER30738.1
Uncharacterized protein YhaN.
  
     0.701
SEQ28726.1
TIR domain-containing protein.
  
     0.700
SER23643.1
CHAT domain-containing protein.
  
     0.686
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.