STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP78757.1Monosaccharide ABC transporter substrate-binding protein, CUT2 family. (327 aa)    
Predicted Functional Partners:
SEP78821.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.990
SER60109.1
Signal transduction histidine kinase.
   
 0.988
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.983
SEP78788.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.978
SES04809.1
DNA-binding transcriptional regulator, LacI/PurR family.
   
 0.956
SEP78905.1
5-deoxyglucuronate isomerase.
 
    0.943
SEP78728.1
2-keto-myo-inositol dehydratase.
 
    0.942
SEP78941.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.940
SEP78839.1
5-dehydro-2-deoxygluconokinase.
 
    0.939
SEP78872.1
Hypothetical protein.
 
  
 0.921
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.