STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP81090.1Hypothetical protein. (101 aa)    
Predicted Functional Partners:
SEP66576.1
Hypothetical protein.
  
     0.774
SEP67444.1
Helix-turn-helix domain-containing protein.
  
     0.774
SEP67839.1
Hypothetical protein.
  
     0.774
SEP72001.1
Hypothetical protein.
  
     0.774
SEQ08867.1
Hypothetical protein.
  
     0.774
SEP88618.1
Type VII secretion protein EccE.
  
     0.773
SEQ71144.1
Hypothetical protein.
  
     0.773
SER26437.1
Hypothetical protein.
  
     0.773
SEP67533.1
Hypothetical protein.
  
     0.772
SEP66340.1
Hypothetical protein.
  
     0.771
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.