STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP90339.1Phage shock protein C (PspC) family protein. (392 aa)    
Predicted Functional Partners:
SEP90374.1
Two component transcriptional regulator, LuxR family.
 
 0.961
SEP90300.1
Phage shock protein C (PspC) family protein.
 
  
 0.945
SER60109.1
Signal transduction histidine kinase.
  
 0.852
SEP90428.1
PAP2 superfamily protein.
       0.786
SEQ82127.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
 0.645
SEP90265.1
Hypothetical protein.
       0.546
SEQ25605.1
Phage shock protein C (PspC) family protein.
 
    0.502
SEQ31620.1
Tight adherence protein B.
  
     0.475
SES29709.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.469
SES29915.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.466
Your Current Organism:
Lechevalieria xinjiangensis
NCBI taxonomy Id: 402600
Other names: CGMCC 4.3525, DSM 45081, JCM 15473, L. xinjiangensis, Lechevalieria xinjiangensis Wang et al. 2007, strain R24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.